r.le.patch crashes with -c flag
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Adam Wilson
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Greetings all,
I am trying to run r.le.patch to create a map of separate 'patches' using the -c flag to drop the edges and only keep core areas of a certain size. To recreate this: g.region n=1 s=0 e=1 w=0 res=.01 ## Make some region r.random.surface output=surface ## create a raster to use as input r.random input=surface n=10 raster_output=points --o ## create some random points r.grow input=points radius=10 output=patch --o ## grow them to make 'patches' r.le.patch -n map=patch sam=w co1=2 co2=c1 ## run r.le.patch with -n flag to identify the patches by number - it works fine r.le.patch -c map=patch sam=w co1=2 co2=c1 ## run r.le.patch with -c flag to identify only 'core areas' - it crashes! It segfaults with the error shown below. I am running the GRASS6.4.0RC5 checked out and compiled this morning on Fedora 11 2.6.30.9-90.fc11.x86_64 Any ideas? Am I doing something wrong or is this a bug? I've tried several settings for the co1 and c02 and it crashes with every combination I have tried. Thanks for any help. ########################################################### GRASS 6.4.0RC5 (CFR):/media/Data > r.le.patch -c map=patch sam=w co1=2 co2=c1 PARAMETER CHOICES: MAP: patch SAMPLE: whole map TRACING: 8 neighbor OUTPUT MAPS: interior CORE MEASURES: mean core size R.LE.PATCH IS WORKING....; *** glibc detected *** r.le.patch: double free or corruption (out): 0x0000000001c92be0 *** ======= Backtrace: ========= /lib64/libc.so.6[0x39e5e75a96] r.le.patch(cell_clip+0x8fa)[0x417cea] r.le.patch(cell_clip_drv+0x18c)[0x4180dc] r.le.patch(patch_fore+0x98)[0x40c2d8] r.le.patch(main+0x4fe)[0x40e61e] /lib64/libc.so.6(__libc_start_main+0xfd)[0x39e5e1ea2d] r.le.patch[0x403109] ======= Memory map: ======== 00400000-0041d000 r-xp 00000000 fd:00 341102 /usr/local/grass-6.4.0RC5/bin/r.le.patch 0061d000-0061e000 rw-p 0001d000 fd:00 341102 /usr/local/grass-6.4.0RC5/bin/r.le.patch 01c4c000-01caf000 rw-p 00000000 00:00 0 [heap] 39e5a00000-39e5a1f000 r-xp 00000000 fd:00 45132 /lib64/ld-2.10.1.so 39e5c1e000-39e5c1f000 r--p 0001e000 fd:00 45132 /lib64/ld-2.10.1.so 39e5c1f000-39e5c20000 rw-p 0001f000 fd:00 45132 /lib64/ld-2.10.1.so 39e5e00000-39e5f64000 r-xp 00000000 fd:00 45133 /lib64/libc-2.10.1.so 39e5f64000-39e6164000 ---p 00164000 fd:00 45133 /lib64/libc-2.10.1.so 39e6164000-39e6168000 r--p 00164000 fd:00 45133 /lib64/libc-2.10.1.so 39e6168000-39e6169000 rw-p 00168000 fd:00 45133 /lib64/libc-2.10.1.so 39e6169000-39e616e000 rw-p 00000000 00:00 0 39e6200000-39e6282000 r-xp 00000000 fd:00 54274 /lib64/libm-2.10.1.so 39e6282000-39e6482000 ---p 00082000 fd:00 54274 /lib64/libm-2.10.1.so 39e6482000-39e6483000 r--p 00082000 fd:00 54274 /lib64/libm-2.10.1.so 39e6483000-39e6484000 rw-p 00083000 fd:00 54274 /lib64/libm-2.10.1.so 39e6600000-39e6602000 r-xp 00000000 fd:00 56013 /lib64/libdl-2.10.1.so 39e6602000-39e6802000 ---p 00002000 fd:00 56013 /lib64/libdl-2.10.1.so 39e6802000-39e6803000 r--p 00002000 fd:00 56013 /lib64/libdl-2.10.1.so 39e6803000-39e6804000 rw-p 00003000 fd:00 56013 /lib64/libdl-2.10.1.so 39e6a00000-39e6a15000 r-xp 00000000 fd:00 56006 /lib64/libz.so.1.2.3 39e6a15000-39e6c14000 ---p 00015000 fd:00 56006 /lib64/libz.so.1.2.3 39e6c14000-39e6c15000 rw-p 00014000 fd:00 56006 /lib64/libz.so.1.2.3 39f0400000-39f0419000 r-xp 00000000 fd:00 116332 /lib64/libgcc_s-4.4.1-20090729.so.1 39f0419000-39f0619000 ---p 00019000 fd:00 116332 /lib64/libgcc_s-4.4.1-20090729.so.1 39f0619000-39f061a000 rw-p 00019000 fd:00 116332 /lib64/libgcc_s-4.4.1-20090729.so.1 7f308a2da000-7f308f3ad000 r--p 00000000 fd:00 56067 /usr/lib/locale/locale-archive 7f308f3ad000-7f308f3b0000 rw-p 00000000 00:00 0 7f308f3d2000-7f308f3da000 r-xp 00000000 fd:00 358068 /usr/local/grass-6.4.0RC5/lib/libgrass_datetime.6.4.0RC5.so 7f308f3da000-7f308f5d9000 ---p 00008000 fd:00 358068 /usr/local/grass-6.4.0RC5/lib/libgrass_datetime.6.4.0RC5.so 7f308f5d9000-7f308f5da000 rw-p 00007000 fd:00 358068 /usr/local/grass-6.4.0RC5/lib/libgrass_datetime.6.4.0RC5.so 7f308f5da000-7f308f5db000 rw-p 00000000 00:00 0 7f308f5db000-7f308f62c000 r-xp 00000000 fd:00 358108 /usr/local/grass-6.4.0RC5/lib/libgrass_gis.6.4.0RC5.so 7f308f62c000-7f308f82c000 ---p 00051000 fd:00 358108 /usr/local/grass-6.4.0RC5/lib/libgrass_gis.6.4.0RC5.so 7f308f82c000-7f308f82e000 rw-p 00051000 fd:00 358108 /usr/local/grass-6.4.0RC5/lib/libgrass_gis.6.4.0RC5.so 7f308f82e000-7f308f838000 rw-p 00000000 00:00 0 7fffcf185000-7fffcf19a000 rw-p 00000000 00:00 0 [stack] 7fffcf1ee000-7fffcf1ef000 r-xp 0000000Aborted _______________________________________________ grass-user mailing list [hidden email] http://lists.osgeo.org/mailman/listinfo/grass-user |
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Markus Neteler
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On Wed, Nov 4, 2009 at 4:48 PM, Adam Wilson
<[hidden email]> wrote: > Greetings all, > > I am trying to run r.le.patch to create a map of separate 'patches' using > the -c flag to drop the edges and only keep core areas of a certain size. > > To recreate this: > > g.region n=1 s=0 e=1 w=0 res=.01 > ## Make some region > r.random.surface > output=surface > ## create a raster to use as input > r.random input=surface n=10 raster_output=points --o > ## create some random points > r.grow input=points radius=10 output=patch > --o ## grow them to make 'patches' > r.le.patch -n map=patch sam=w co1=2 > co2=c1 ## run r.le.patch with -n flag > to identify the patches by number - it works fine > r.le.patch -c map=patch sam=w co1=2 > co2=c1 ## run r.le.patch with -c flag > to identify only 'core areas' - it crashes! > > It segfaults with the error shown below. I am running the GRASS6.4.0RC5 > checked out and compiled this morning on Fedora 11 2.6.30.9-90.fc11.x86_64 > > Any ideas? Am I doing something wrong or is this a bug? A bug since a program should never crash like this. I can reproduce it, now handled via trac at: http://trac.osgeo.org/grass/ticket/801 Hope we find a solution soon. Markus _______________________________________________ grass-user mailing list [hidden email] http://lists.osgeo.org/mailman/listinfo/grass-user |
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